STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlet_1388PFAM: cytochrome b5; KEGG: cpe:CPE2499 hypothetical protein. (304 aa)    
Predicted Functional Partners:
corA
Magnesium and cobalt transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.
       0.727
Tlet_0106
PFAM: protein of unknown function DUF187; KEGG: cyb:CYB_0076 hypothetical protein.
  
     0.702
Tlet_1387
PFAM: glycoside hydrolase family 4; KEGG: tma:TM1834 alpha-glucosidase.
       0.531
Tlet_1669
PFAM: metallophosphoesterase; SMART: Pyrrolo-quinoline quinone; KEGG: bfs:BF0376 putative PQQ-binding exported phosphoesterase.
  
     0.459
Tlet_1386
Hypothetical protein.
       0.439
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.