STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlet_1543PFAM: glycoside hydrolase family 20; KEGG: sth:STH304 N-acetyl-beta-hexosaminidase. (609 aa)    
Predicted Functional Partners:
Tlet_0915
PFAM: glycoside hydrolase family 42 domain 5 loop region; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; KEGG: tma:TM1193 beta-galactosidase.
  
 0.923
Tlet_1296
PFAM: glycoside hydrolase family 42 domain 5 loop region; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; KEGG: tma:TM1193 beta-galactosidase.
  
 0.923
Tlet_0035
PFAM: glycoside hydrolase family 3 domain protein; KEGG: tma:TM0809 hydrolase, putative.
    
 0.910
Tlet_1691
PFAM: glycoside hydrolase family 3 domain protein; KEGG: tte:TTE0215 Beta-glucosidase-related glycosidases.
    
 0.910
Tlet_1335
PFAM: glycoside hydrolase family 1; KEGG: sso:SSO3019 beta-galactosidase; Belongs to the glycosyl hydrolase 1 family.
    
 0.908
Tlet_1444
PFAM: glycoside hydrolase family 1; KEGG: sai:Saci_1849 beta-galactosidase; Belongs to the glycosyl hydrolase 1 family.
    
 0.908
Tlet_1443
KEGG: tma:TM1192 alpha-galactosidase.
    
 0.905
Tlet_1848
PFAM: glycoside hydrolase family 20; KEGG: sth:STH304 N-acetyl-beta-hexosaminidase.
  
  
 
0.902
Tlet_1545
KEGG: tpe:Tpen_1095 hypothetical protein.
 
  
 0.704
Tlet_1544
PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: oih:OB2555 hypothetical protein.
 
    0.697
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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