STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlet_1545KEGG: tpe:Tpen_1095 hypothetical protein. (373 aa)    
Predicted Functional Partners:
Tlet_0213
Isoaspartyl dipeptidase; Catalyzes the hydrolytic cleavage of a subset of L- isoaspartyl (L-beta-aspartyl) dipeptides. Used to degrade proteins damaged by L-isoaspartyl residues formation. Belongs to the peptidase M38 family.
  
 
 0.901
Tlet_1990
TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; KEGG: tpe:Tpen_1093 N-acetylglucosamine-6-phosphate deacetylase.
  
 
 0.876
Tlet_1546
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ava:Ava_2094 binding-protein-dependent transport systems inner membrane component.
     
 0.780
Tlet_1547
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bld:BLi04181 YurN.
       0.763
Tlet_1544
PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: oih:OB2555 hypothetical protein.
  
    0.754
Tlet_1543
PFAM: glycoside hydrolase family 20; KEGG: sth:STH304 N-acetyl-beta-hexosaminidase.
 
  
 0.704
Tlet_1550
KEGG: gka:GK1441 hypothetical protein.
 
     0.684
Tlet_1548
PFAM: extracellular solute-binding protein family 1; KEGG: hma:pNG7340 putative extracellular solute binding protein.
       0.550
pgi
PFAM: phosphoglucose isomerase (PGI); KEGG: tma:TM1385 glucose-6-phosphate isomerase; Belongs to the GPI family.
  
  
 0.515
Tlet_0219
KEGG: ace:Acel_0562 uncharacterized protein containing SIS (sugar isomerase) phosphosugar binding domain-like.
 
     0.491
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.