STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
Tlet_1573PFAM: aldo/keto reductase; KEGG: tma:TM1009 oxidoreductase, aldo/keto reductase family. (286 aa)    
Predicted Functional Partners:
Tlet_1574
PFAM: aldo/keto reductase; KEGG: tma:TM1006 oxidoreductase, aldo/keto reductase family.
  
 
0.715
Tlet_1571
KEGG: tma:TM0990 hypothetical protein.
   
 
 0.700
Tlet_1572
PFAM: Cupin 2 conserved barrel domain protein; KEGG: tma:TM1010 hypothetical protein.
       0.672
Tlet_1570
KEGG: mba:Mbar_A0781 hypothetical protein.
 
     0.569
Tlet_1664
PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: tte:TTE0722 hypothetical protein.
  
 
 0.547
Tlet_0060
PFAM: Transketolase domain protein; Transketolase central region; KEGG: tma:TM1762 transketolase.
   
 
 0.538
Tlet_1365
PFAM: dihydropteroate synthase DHPS; homocysteine S-methyltransferase; Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; KEGG: tma:TM0268 5-methyltetrahydrofolate S-homocysteine methyltransferase.
  
 0.517
Tlet_1569
KEGG: ypn:YPN_1484 membrane protein.
 
     0.502
Tlet_1568
KEGG: pca:Pcar_1078 putative flavodoxin.
 
    0.468
Tlet_0190
PFAM: aldo/keto reductase; KEGG: sfu:Sfum_1762 aldo/keto reductase.
  
 
 0.448
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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