STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlet_1612PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: tma:TM0659 rubredoxin. (54 aa)    
Predicted Functional Partners:
Tlet_1613
PFAM: Rubrerythrin; Rubredoxin-type Fe(Cys)4 protein; KEGG: tma:TM0657 rubrerythrin.
  
  
 0.876
Tlet_1498
Superoxide reductase; PFAM: Desulfoferrodoxin ferrous iron-binding region; KEGG: tma:TM0658 putative superoxide reductase.
  
  
 0.768
Tlet_1499
PFAM: beta-lactamase domain protein; flavodoxin/nitric oxide synthase; KEGG: ppd:Ppro_2889 beta-lactamase domain protein.
 
  
 0.541
Tlet_1614
PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: tma:TM1581 hypothetical protein.
       0.527
Tlet_1615
PFAM: protein of unknown function DUF458; KEGG: tma:TM1582 hypothetical protein.
       0.517
Tlet_0977
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
  
  
 0.506
Tlet_0978
Ferritin Dps family protein; Iron-storage protein.
  
  
 0.503
Tlet_1616
Hypothetical protein.
       0.489
Tlet_0821
PFAM: nitroreductase; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: tma:TM0386 bacterioferritin comigratory protein/NADH dehydrogenase.
  
  
 0.470
Tlet_1617
Hypothetical protein.
       0.461
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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