STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlet_1643PFAM: major facilitator superfamily MFS_1; KEGG: dra:DR1743 fosmidomycin resistance protein, putative. (348 aa)    
Predicted Functional Partners:
Tlet_1644
PFAM: protein of unknown function UPF0118; KEGG: tma:TM1349 hypothetical protein.
 
   
 0.821
Tlet_1645
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: tma:TM1177 hypothetical protein.
       0.762
Tlet_1642
Conserved hypothetical protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
     
 0.590
Tlet_1094
PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: tma:TM1432 glycerol-3-phosphate dehydrogenase.
  
  
 0.557
Tlet_1631
PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: tma:TM0448 hypothetical protein.
 
     0.513
Tlet_0384
Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: tma:TM1359 sensor histidine kinase.
 
  
 0.492
Tlet_1447
Glutamine amidotransferase-like protein; KEGG: sai:Saci_1847 glutamine amidotransferase class-II.
  
     0.488
Tlet_1635
Putative signal transduction protein with CBS domains; PFAM: CBS domain containing protein; ATP-binding region ATPase domain protein; KEGG: tma:TM1354 inosine-5-monophosphate dehydrogenase-related protein.
  
    0.481
Tlet_1845
PFAM: Cupin 2 conserved barrel domain protein; KEGG: tma:TM1459 hypothetical protein.
 
     0.480
Tlet_0431
Chloride channel core; PFAM: TrkA-C domain protein; Chloride channel core; KEGG: cno:NT01CX_0195 voltage gated chloride channel family protein.
   
  
 0.465
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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