STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlet_1672PFAM: protein of unknown function DUF187; KEGG: oih:OB2153 hypothetical protein. (367 aa)    
Predicted Functional Partners:
Tlet_1673
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mca:MCA1924 sugar ABC transporter, permease protein.
       0.779
Tlet_1675
PFAM: extracellular solute-binding protein family 1; KEGG: tte:TTE1917 sugar-binding periplasmic proteins/domains.
       0.776
Tlet_1674
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC3124 sugar ABC transporter permease.
       0.773
Tlet_1669
PFAM: metallophosphoesterase; SMART: Pyrrolo-quinoline quinone; KEGG: bfs:BF0376 putative PQQ-binding exported phosphoesterase.
 
     0.760
Tlet_1676
Hypothetical protein.
       0.748
Tlet_1671
Hypothetical protein.
       0.744
Tlet_1549
Conserved hypothetical protein; KEGG: ter:Tery_3463 protein of unknown function DUF187.
  
     0.712
Tlet_1670
PFAM: cell wall hydrolase/autolysin; KEGG: tte:TTE2424 N-acetylmuramoyl-L-alanine amidase.
 
     0.672
Tlet_1551
KEGG: ava:Ava_0631 protein of unknown function DUF187.
  
     0.544
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.