STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlet_1679Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: bce:BC0766 methylthioribose transport system permease protein. (336 aa)    
Predicted Functional Partners:
Tlet_1325
Monosaccharide-transporting ATPase; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: tma:TM0958 D-ribose transport system substrate-binding protein.
 
 0.985
Tlet_1678
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tma:TM0956 D-ribose transport system ATP-binding protein.
 
 0.967
Tlet_1677
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: gka:GK0948 ribose ABC transporter (substrate-binding protein).
 
 
 0.958
Tlet_0389
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: dge:Dgeo_2825 periplasmic binding protein/LacI transcriptional regulator.
 
 0.951
Tlet_0359
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: tma:TM0114 simple sugar transport system substrate-binding protein.
 
 0.874
Tlet_0184
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rxy:Rxyl_3003 ABC transporter related.
 
 0.860
mtnK
5-methylthioribose kinase; Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate.
 
   
 0.854
rbsA-2
ABC transporter related; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.851
Tlet_0182
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ctc:CTC00907 D-ribose-binding periplasmic protein.
 
 0.848
rbsA
ABC transporter related; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.843
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.