STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
buk-2TIGRFAM: Butyrate kinase; PFAM: acetate and butyrate kinase; KEGG: tma:TM1754 putative butyrate kinase 1; Belongs to the acetokinase family. (359 aa)    
Predicted Functional Partners:
Tlet_1764
PFAM: phosphate acetyl/butaryl transferase; KEGG: tma:TM1130 phosphate acetyltransferase.
 
 0.998
Tlet_0701
PFAM: phosphate acetyl/butaryl transferase; KEGG: bcz:BCZK3918 phosphate acetyltransferase.
 
 0.994
buk
TIGRFAM: Butyrate kinase; PFAM: acetate and butyrate kinase; KEGG: tma:TM1756 putative butyrate kinase 2; Belongs to the acetokinase family.
 
  
 
0.981
Tlet_1556
TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; KEGG: rru:Rru_A1472 acetate CoA-transferase.
     
 0.912
Tlet_1555
TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; KEGG: rru:Rru_A1471 butyrate-acetoacetate CoA-transferase.
     
 0.904
Tlet_1766
Putative transcriptional regulator, GntR family; PFAM: aminotransferase class I and II; KEGG: tma:TM1131 aminotransferase, putative.
       0.829
Tlet_1760
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: tma:TM1759 2-oxoisovalerate ferredoxin oxidoreductase, alpha subunit.
     
 0.825
Tlet_1758
TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: swo:Swol_1398 2-oxoglutarate oxidoreductase gamma subunit.
     
 0.823
Tlet_1759
PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: swo:Swol_1399 putative keto/oxoacid ferredoxin oxidoreductase, beta subunit.
     
 0.823
Tlet_1762
KEGG: tte:TTE2200 hypothetical protein.
       0.817
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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