Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tlet_1889KEGG: tma:TM0609 hypothetical protein. (363 aa)    
Predicted Functional Partners:
Tlet_1888
PFAM: glycosyl transferase family 2; KEGG: ctc:CTC02258 succinoglycan biosynthesis protein ExoA.
 
  
 0.861
Tlet_1188
PFAM: polysaccharide biosynthesis protein; KEGG: tma:TM0620 lipopolysaccharide biosynthesis protein.
 
  
 0.811
Tlet_2020
PFAM: regulatory protein MarR; KEGG: gme:Gmet_2889 hypothetical protein.
 
  
 0.807
Tlet_0774
PFAM: O-antigen polymerase; KEGG: tma:TM0806 hypothetical protein.
 
  
 0.783
Tlet_1850
KEGG: tma:TM0929 hypothetical protein.
  
     0.757
Tlet_1321
PFAM: protein of unknown function DUF214; KEGG: tma:TM0706 hypothetical protein.
  
    0.741
Tlet_1851
PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: tma:TM0930 hypothetical protein.
  
     0.734
Tlet_0880
KEGG: tma:TM0767 maltodextrin glycosyltransferase.
 
 
 
 0.730
Tlet_0055
KEGG: tma:TM1046 hypothetical protein.
  
     0.726
Tlet_1472
PFAM: outer membrane chaperone Skp (OmpH); KEGG: tma:TM1053 cationic outer membrane protein.
  
    0.717
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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