STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlet_1951TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: tma:TM1254 beta-phosphoglucomutase, putative. (225 aa)    
Predicted Functional Partners:
Tlet_1954
PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: tma:TM1700 hypothetical protein.
  
 
 0.802
Tlet_1952
Hypothetical protein.
     
 0.777
Tlet_1953
KEGG: tma:TM0517 hypothetical protein.
       0.773
Tlet_1955
Hypothetical protein.
       0.551
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
  
  
 0.459
Tlet_1767
PFAM: aminotransferase class V; KEGG: tma:TM1400 putative aminotransferase.
     
 0.453
pgi
PFAM: phosphoglucose isomerase (PGI); KEGG: tma:TM1385 glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.439
Tlet_1990
TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; KEGG: tpe:Tpen_1093 N-acetylglucosamine-6-phosphate deacetylase.
 
     0.415
Tlet_1230
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: shn:Shewana3_2311 alpha amylase, catalytic region.
 
  
 0.410
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.