STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlet_2008PFAM: extracellular solute-binding protein family 5; KEGG: bld:BLi01226 oligopeptide ABC transporter (oligopeptide-binding protein); RBL00623. (610 aa)    
Predicted Functional Partners:
Tlet_2006
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cac:CAC0178 oligopeptide transport permease protein.
 
   0.911
Tlet_2007
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tma:TM0532 putative oligopeptide transport system permease protein.
 
   0.883
Tlet_0853
PFAM: extracellular solute-binding protein family 5; KEGG: sil:SPO1543 peptide/opine/nickel uptake family ABC transporter, periplasmic substrate-binding protein.
  
  
  0.717
Tlet_2005
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: pho:PH1959 putative oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
    0.684
Tlet_2004
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: tma:TM0500 putative oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
    0.622
Tlet_2009
Glycine C-acetyltransferase; PFAM: aminotransferase class I and II; KEGG: tte:TTE2406 7-keto-8-aminopelargonate synthetase and related enzymes.
       0.563
Tlet_2002
Hypothetical protein.
       0.554
Tlet_2003
Hypothetical protein.
       0.554
Tlet_1531
PFAM: extracellular solute-binding protein family 5; KEGG: dge:Dgeo_2510 extracellular solute-binding protein, family 5.
  
  
 
0.547
Tlet_2026
PFAM: extracellular solute-binding protein family 5; KEGG: mxa:MXAN_6551 putative oligopeptide/dipeptide ABC transporter, periplasmic oligopeptide/dipeptide-binding protein.
  
  
 
0.516
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.