STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlet_2025PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: art:Arth_0399 binding-protein-dependent transport systems inner membrane component. (324 aa)    
Predicted Functional Partners:
Tlet_2024
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sit:TM1040_2743 binding-protein-dependent transport systems inner membrane component.
    0.968
Tlet_2026
PFAM: extracellular solute-binding protein family 5; KEGG: mxa:MXAN_6551 putative oligopeptide/dipeptide ABC transporter, periplasmic oligopeptide/dipeptide-binding protein.
 
   0.939
Tlet_2023
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: vvy:VVA0135 peptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
    0.915
Tlet_2022
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: llm:llmg_1460 putative di/TRI-peptide transport ATP-binding protein; Belongs to the ABC transporter superfamily.
    0.873
Tlet_1440
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tma:TM1221 putative oligopeptide transport system permease protein.
    0.839
Tlet_0352
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tma:TM0073 putative oligopeptide transport system permease protein.
    0.819
Tlet_1438
PFAM: extracellular solute-binding protein family 5; KEGG: tma:TM1223 putative oligopeptide transport system substrate-binding protein.
 
   0.812
Tlet_2006
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cac:CAC0178 oligopeptide transport permease protein.
    0.791
Tlet_0350
PFAM: extracellular solute-binding protein family 5; KEGG: tma:TM0071 putative oligopeptide transport system substrate-binding protein.
 
   0.580
Tlet_1308
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rxy:Rxyl_0874 binding-protein-dependent transport systems inner membrane component.
    0.547
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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