Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| clpP | clpX | llmg_0638 | llmg_1340 | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. | ATP-dependent Clp protease ATP-binding subunit clpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | 0.997 |
| clpP | dnaK | llmg_0638 | llmg_1574 | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. | Chaperone protein dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.955 |
| clpP | ftsH | llmg_0638 | llmg_0021 | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. | Putative cell division protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.877 |
| clpP | groEL2 | llmg_0638 | llmg_0411 | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. | Heat shock protein groEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.944 |
| clpX | clpP | llmg_1340 | llmg_0638 | ATP-dependent Clp protease ATP-binding subunit clpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. | 0.997 |
| clpX | dnaK | llmg_1340 | llmg_1574 | ATP-dependent Clp protease ATP-binding subunit clpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | Chaperone protein dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.853 |
| clpX | folE | llmg_1340 | llmg_1337 | ATP-dependent Clp protease ATP-binding subunit clpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | Bifunctional protein folE [Includes: 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) (7,8 dihydro-6-hydroxymethylpterin-pyrophosphokinase) (HPPK) (6- hydroxymethyl-7,8-dihydropterin pyrophosphokinase) (PPPK); GTP cyclohydrolase I (EC 3.5.4.16) (GTP-CH-I)]; High confidence in function and specificity; In the C-terminal section; belongs to the GTP cyclohydrolase I family. | 0.574 |
| clpX | ftsH | llmg_1340 | llmg_0021 | ATP-dependent Clp protease ATP-binding subunit clpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | Putative cell division protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.826 |
| clpX | groEL2 | llmg_1340 | llmg_0411 | ATP-dependent Clp protease ATP-binding subunit clpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | Heat shock protein groEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.869 |
| clpX | secA | llmg_1340 | llmg_0124 | ATP-dependent Clp protease ATP-binding subunit clpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | Preprotein translocase secA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family. | 0.421 |
| dnaK | clpP | llmg_1574 | llmg_0638 | Chaperone protein dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. | 0.955 |
| dnaK | clpX | llmg_1574 | llmg_1340 | Chaperone protein dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | ATP-dependent Clp protease ATP-binding subunit clpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | 0.853 |
| dnaK | folE | llmg_1574 | llmg_1337 | Chaperone protein dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Bifunctional protein folE [Includes: 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) (7,8 dihydro-6-hydroxymethylpterin-pyrophosphokinase) (HPPK) (6- hydroxymethyl-7,8-dihydropterin pyrophosphokinase) (PPPK); GTP cyclohydrolase I (EC 3.5.4.16) (GTP-CH-I)]; High confidence in function and specificity; In the C-terminal section; belongs to the GTP cyclohydrolase I family. | 0.540 |
| dnaK | ftsH | llmg_1574 | llmg_0021 | Chaperone protein dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Putative cell division protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.885 |
| dnaK | groEL2 | llmg_1574 | llmg_0411 | Chaperone protein dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Heat shock protein groEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.997 |
| dnaK | infB | llmg_1574 | llmg_1792 | Chaperone protein dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.452 |
| dnaK | oxaA2 | llmg_1574 | llmg_0540 | Chaperone protein dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Membrane protein oxaA 2 precursor; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins; Belongs to the OXA1/ALB3/YidC family. Type 2 subfamily. | 0.562 |
| dnaK | secA | llmg_1574 | llmg_0124 | Chaperone protein dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Preprotein translocase secA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family. | 0.806 |
| folE | clpX | llmg_1337 | llmg_1340 | Bifunctional protein folE [Includes: 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) (7,8 dihydro-6-hydroxymethylpterin-pyrophosphokinase) (HPPK) (6- hydroxymethyl-7,8-dihydropterin pyrophosphokinase) (PPPK); GTP cyclohydrolase I (EC 3.5.4.16) (GTP-CH-I)]; High confidence in function and specificity; In the C-terminal section; belongs to the GTP cyclohydrolase I family. | ATP-dependent Clp protease ATP-binding subunit clpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | 0.574 |
| folE | dnaK | llmg_1337 | llmg_1574 | Bifunctional protein folE [Includes: 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) (7,8 dihydro-6-hydroxymethylpterin-pyrophosphokinase) (HPPK) (6- hydroxymethyl-7,8-dihydropterin pyrophosphokinase) (PPPK); GTP cyclohydrolase I (EC 3.5.4.16) (GTP-CH-I)]; High confidence in function and specificity; In the C-terminal section; belongs to the GTP cyclohydrolase I family. | Chaperone protein dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.540 |
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