STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ps126Putative DNA primase; Similar to ps105 from IL1403, Phage associated; Family membership. (542 aa)    
Predicted Functional Partners:
ps125
Phage dna replication.
 
     0.849
ps124
Conserved hypothetical protein.
       0.768
ps123
Conserved hypothetical protein.
       0.768
ps122
Conserved hypothetical protein.
       0.768
ps121
Putative DNA binding protein.
       0.638
ps120
Conserved hypothetical protein.
       0.629
ps119
Conserved hypothetical protein; Similar to ps113 of IL1403, Protein of unknown function (DUF1655), Phage associated.
       0.629
ps501
PF00589: Phage integrase family; Conserved hypothetical protein; Belongs to the 'phage' integrase family.
 
     0.543
ps401
Phage integrase family; High confidence in function and specificity; Belongs to the 'phage' integrase family.
 
     0.514
ps101
Phage integrase; DNA breaking-rejoining enzyme, catalytic core, Tyrosine recombinase xerD; Conserved hypothetical protein; Belongs to the 'phage' integrase family.
 
     0.508
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.