STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
llmg_0105Conserved hypothetical protein. (155 aa)    
Predicted Functional Partners:
llmg_0106
Similar to ABC transporter (ATP-binding protein); ABC transporter related; Family membership.
       0.675
llmg_1763
Conserved hypothetical protein.
  
     0.638
mutT
Putative mutator protein; ADP-ribose pyrophosphatase (EC 3.6.1.13) (ADP-ribose diphosphatase) (Adenosine diphosphoribose pyrophosphatase) (ADPR-PPase) (ADP-ribose phosphohydrolase)., NUDIX hydrolase, NUDIX domain; High confidence in function and specificity; Belongs to the Nudix hydrolase family.
 
     0.553
llmg_2422
Hypothetical protein predicted by Glimmer/Critica.
  
     0.543
llmg_0104
GCN5-related N-acetyltransferase, Acetyltransferase (GNAT) family; High confidence in function and specificity.
       0.538
cshA
Chromosome segregation helicase; High confidence in function and specificity.
       0.518
llmg_1727
ABC transporter permease protein.
  
     0.507
llmg_0107
Hypothetical protein predicted by Glimmer/Critica.
       0.497
llmg_0183
Hypothetical protein predicted by Glimmer/Critica.
  
     0.495
llmg_0108
S-adenosylmethionine-dependent methyltransferase, SAM (and some other nucleotide) binding motif; Family membership.
 
     0.468
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.