STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sugEEmrE protein (Methyl viologen resistance protein C), (Ethidium resistance protein); Specificity unclear. (106 aa)    
Predicted Functional Partners:
llmg_0268
ABC transporter ATP binding protein; Specificity unclear.
      
 0.560
llmg_0269
ABC transporter ATP-binding and permease protein; Specificity unclear.
      
 0.560
llmg_1848
Hypothetical protein predicted by Glimmer/Critica.
      
 0.552
blt
Multidrug resistance protein 1 (Multidrug-efflux transporter 1)., General substrate transporter, Major Facilitator Superfamily, 2_A_01_02: Multidrug resistance protein; High confidence in function and specificity.
  
  
 0.520
llmg_1210
Multidrug resistance protein; PF07690: Major facilitator superfamily, TIGR00711: drug resistance transporter, EmrB/QacA subfamily; Conserved hypothetical protein.
      
 0.473
cspD
PF00313: Cold-shock protein, DNA-binding; Conserved hypothetical protein.
      
 0.461
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
  
 0.457
llmg_0131
Hypothetical protein predicted by Glimmer/Critica.
       0.452
topA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]
     
 0.430
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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