STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
llmg_0150Hypothetical protein predicted by Glimmer/Critica; Belongs to the UPF0297 family. (88 aa)    
Predicted Functional Partners:
llmg_0151
Putative Hollyday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.
 
    0.957
llmg_0152
Conserved hypothetical protein; Belongs to the UPF0473 family.
  
  
 0.787
llmg_1500
Similar to SAM-dependent methyltransferases; Conserved hypothetical protein.
  
     0.743
llmg_1069
Conserved hypothetical protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.
  
     0.710
llmg_1988
Conserved hypothetical protein; Polysaccharide biosynthesis protein.
  
     0.691
llmg_1879
Conserved hypothetical protein; Protein of unknown function DUF322.
  
    0.674
whiA
Conserved hypothetical protein; Involved in cell division and chromosome segregation.
  
     0.668
llmg_0005
Conserved hypothetical protein; Bacterial protein of unknown function DUF951.
  
     0.667
mrnC
Ribonuclease III (EC 3.1.26.3) (RNase III); Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.
  
     0.659
polC
DNA polymerase III alpha subunit; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
  
     0.651
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.