STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
llmg_0160Oxygen-insensitive NAD(P)H nitroreductase; FMN-dependent nitroreductase (Dihydropteridine reductase); Conserved hypothetical protein. (212 aa)    
Predicted Functional Partners:
llmg_0161
Putative HTH-type transcriptional regulator; Homeodomain-like, Bacterial regulatory proteins, tetR family; Conserved hypothetical protein.
 
     0.698
llmg_0159
Conserved hypothetical protein.
       0.519
llmg_1084
Putative membrane protein.
  
     0.412
menE
O-succinylbenzoic acid--CoA ligase; Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl-CoA (OSB-CoA); Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily.
   
 
 0.409
llmg_1965
Putative AMP-binding enzyme; Acetyl-coenzyme A synthetase; High confidence in function and specificity.
   
 
 0.409
llmg_0262
Pseudogene; ABC transporter ATP binding protein, Contains a stopcodon at position 591; Specificity unclear.
  
    0.404
drrB
Daunorubicin resistance transmembrane protein; Belongs to the ABC-2 integral membrane protein family; Conserved hypothetical protein.
  
    0.404
llmg_0502
ABC transporter permease protein; Specificity unclear.
  
    0.404
tnp905-3
Pseudogene; Transposase for insertion sequence element IS905D, contains a stop codon at position 606; High confidence in function and specificity.
  
     0.401
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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