Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cysD | llmg_0167 | llmg_0091 | llmg_0167 | OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase, Cystathionine beta-lyases/cystathionine gamma-synthases; High confidence in function and specificity. | Pseudogene; Putative transporter, Major facilitator superfamily, Contains a frameshift at position 429. | 0.912 |
| cysD | metB1 | llmg_0091 | llmg_2181 | OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase, Cystathionine beta-lyases/cystathionine gamma-synthases; High confidence in function and specificity. | Pseudogene. | 0.939 |
| cysD | metC | llmg_0091 | llmg_1776 | OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase, Cystathionine beta-lyases/cystathionine gamma-synthases; High confidence in function and specificity. | Cystathionine beta-lyase; The enzymatic degradation of amino acids in cheese is believed to generate aroma compounds and therefore to be essential for flavor development. Cystathionine beta-lyase (CBL) can convert cystathionine to homocysteine but is also able to catalyze an alpha, gamma elimination. With methionine as a substrate, it produces volatile sulfur compounds which are important for flavor formation in Gouda cheese; Belongs to the trans-sulfuration enzymes family. | 0.928 |
| fur | llmg_0167 | llmg_1023 | llmg_0167 | Pseudogene; Transposase for insertion sequence element IS905E, contains a stop codon at position 606; High confidence in function and specificity; Belongs to the Fur family. | Pseudogene; Putative transporter, Major facilitator superfamily, Contains a frameshift at position 429. | 0.550 |
| llmg_0167 | cysD | llmg_0167 | llmg_0091 | Pseudogene; Putative transporter, Major facilitator superfamily, Contains a frameshift at position 429. | OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase, Cystathionine beta-lyases/cystathionine gamma-synthases; High confidence in function and specificity. | 0.912 |
| llmg_0167 | fur | llmg_0167 | llmg_1023 | Pseudogene; Putative transporter, Major facilitator superfamily, Contains a frameshift at position 429. | Pseudogene; Transposase for insertion sequence element IS905E, contains a stop codon at position 606; High confidence in function and specificity; Belongs to the Fur family. | 0.550 |
| llmg_0167 | llmg_0168 | llmg_0167 | llmg_0168 | Pseudogene; Putative transporter, Major facilitator superfamily, Contains a frameshift at position 429. | Deoxyribonuclease; DNA/RNA non-specific endonuclease; High confidence in function and specificity. | 0.530 |
| llmg_0167 | metB1 | llmg_0167 | llmg_2181 | Pseudogene; Putative transporter, Major facilitator superfamily, Contains a frameshift at position 429. | Pseudogene. | 0.828 |
| llmg_0167 | metC | llmg_0167 | llmg_1776 | Pseudogene; Putative transporter, Major facilitator superfamily, Contains a frameshift at position 429. | Cystathionine beta-lyase; The enzymatic degradation of amino acids in cheese is believed to generate aroma compounds and therefore to be essential for flavor development. Cystathionine beta-lyase (CBL) can convert cystathionine to homocysteine but is also able to catalyze an alpha, gamma elimination. With methionine as a substrate, it produces volatile sulfur compounds which are important for flavor formation in Gouda cheese; Belongs to the trans-sulfuration enzymes family. | 0.732 |
| llmg_0167 | msrB | llmg_0167 | llmg_0201 | Pseudogene; Putative transporter, Major facilitator superfamily, Contains a frameshift at position 429. | Peptide methionine sulfoxide reductase msrB 2, Mss4-like, SelR domain, TIGR00357: methionine-R-sulfoxide reductase; High confidence in function and specificity. | 0.721 |
| llmg_0168 | llmg_0167 | llmg_0168 | llmg_0167 | Deoxyribonuclease; DNA/RNA non-specific endonuclease; High confidence in function and specificity. | Pseudogene; Putative transporter, Major facilitator superfamily, Contains a frameshift at position 429. | 0.530 |
| metB1 | cysD | llmg_2181 | llmg_0091 | Pseudogene. | OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase, Cystathionine beta-lyases/cystathionine gamma-synthases; High confidence in function and specificity. | 0.939 |
| metB1 | llmg_0167 | llmg_2181 | llmg_0167 | Pseudogene. | Pseudogene; Putative transporter, Major facilitator superfamily, Contains a frameshift at position 429. | 0.828 |
| metB1 | metC | llmg_2181 | llmg_1776 | Pseudogene. | Cystathionine beta-lyase; The enzymatic degradation of amino acids in cheese is believed to generate aroma compounds and therefore to be essential for flavor development. Cystathionine beta-lyase (CBL) can convert cystathionine to homocysteine but is also able to catalyze an alpha, gamma elimination. With methionine as a substrate, it produces volatile sulfur compounds which are important for flavor formation in Gouda cheese; Belongs to the trans-sulfuration enzymes family. | 0.914 |
| metC | cysD | llmg_1776 | llmg_0091 | Cystathionine beta-lyase; The enzymatic degradation of amino acids in cheese is believed to generate aroma compounds and therefore to be essential for flavor development. Cystathionine beta-lyase (CBL) can convert cystathionine to homocysteine but is also able to catalyze an alpha, gamma elimination. With methionine as a substrate, it produces volatile sulfur compounds which are important for flavor formation in Gouda cheese; Belongs to the trans-sulfuration enzymes family. | OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase, Cystathionine beta-lyases/cystathionine gamma-synthases; High confidence in function and specificity. | 0.928 |
| metC | llmg_0167 | llmg_1776 | llmg_0167 | Cystathionine beta-lyase; The enzymatic degradation of amino acids in cheese is believed to generate aroma compounds and therefore to be essential for flavor development. Cystathionine beta-lyase (CBL) can convert cystathionine to homocysteine but is also able to catalyze an alpha, gamma elimination. With methionine as a substrate, it produces volatile sulfur compounds which are important for flavor formation in Gouda cheese; Belongs to the trans-sulfuration enzymes family. | Pseudogene; Putative transporter, Major facilitator superfamily, Contains a frameshift at position 429. | 0.732 |
| metC | metB1 | llmg_1776 | llmg_2181 | Cystathionine beta-lyase; The enzymatic degradation of amino acids in cheese is believed to generate aroma compounds and therefore to be essential for flavor development. Cystathionine beta-lyase (CBL) can convert cystathionine to homocysteine but is also able to catalyze an alpha, gamma elimination. With methionine as a substrate, it produces volatile sulfur compounds which are important for flavor formation in Gouda cheese; Belongs to the trans-sulfuration enzymes family. | Pseudogene. | 0.914 |
| msrB | llmg_0167 | llmg_0201 | llmg_0167 | Peptide methionine sulfoxide reductase msrB 2, Mss4-like, SelR domain, TIGR00357: methionine-R-sulfoxide reductase; High confidence in function and specificity. | Pseudogene; Putative transporter, Major facilitator superfamily, Contains a frameshift at position 429. | 0.721 |