STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
enoBPseudogene; Enolase B, Contains a stopcodon at position 808; High confidence in function and specificity. (489 aa)    
Predicted Functional Partners:
icd
Isocitrate dehydrogenase; High confidence in function and specificity.
     
 0.764
ctrA
Putative amino-acid transporter; Amino acid permease-associated region, COG: Amino acid transporters, PFAM: Amino acid permease, 2A0306: amino acid transporter; Conserved hypothetical protein.
   
 
 0.522
citB
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
   
  
 0.474
gltB
Glutamate synthase, large subunit; PF01645: Conserved region in glutamate synthase; High confidence in function and specificity.
     
 0.469
ftsK
DNA translocase ftsK; Essential cell division protein that coordinates cell division and chromosome segregation. The N-terminus is involved in assembly of the cell-division machinery. The C-terminus functions as a DNA motor that moves dsDNA in an ATP-dependent manner towards the difSL recombination site, which is located within the replication terminus region (By similarity). Required for activation of the XerS recombinase, allowing activation of chromosome unlinking by recombination; Belongs to the FtsK/SpoIIIE/SftA family.
  
 
 0.444
llmg_1014
Conserved hypothetical protein; Contains Proteinase inhibitor I11 ecotin domain (SSF49772).
  
 
 0.423
llmg_1127
Cell wall surface anchor family protein; Carboxypeptidase regulatory region; Conserved hypothetical protein.
  
 
 0.423
llmg_1129
Surface protein from Gram-positive cocci, anchor region.
  
 
 0.423
llmg_1152
Conserved hypothetical protein; PF07523: Bacterial Ig-like domain (group 3).
  
 
 0.423
llmg_1503
TIGR02167: Bacterial surface protein 26-residue repeat; Family membership.
  
 
 0.423
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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