STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
metNAmino acid ABC transporter ATP binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (368 aa)    
Predicted Functional Partners:
llmg_0342
Amino acid ABC transporter permease protein; Specificity unclear.
 0.999
plpD
D-methionine-binding lipoprotein plpD precursor; High confidence in function and specificity; Belongs to the nlpA lipoprotein family.
 0.993
plpC
D-methionine-binding lipoprotein plpC precursor; High confidence in function and specificity; Belongs to the nlpA lipoprotein family.
 0.992
plpA
D-methionine-binding lipoprotein plpA precursor; High confidence in function and specificity; Belongs to the nlpA lipoprotein family.
 0.990
plpB
D-methionine-binding lipoprotein plpB precursor; High confidence in function and specificity; Belongs to the nlpA lipoprotein family.
 0.990
llmg_1458
Putative Di/Tri-peptide transport system permease protein; Specificity unclear.
 
    0.868
llmg_0268
ABC transporter ATP binding protein; Specificity unclear.
 
    
0.813
oppC
Binding-protein-dependent transport systems inner membrane component; High confidence in function and specificity.
 
  
 0.744
metF
MetF protein; PF02219: Methylenetetrahydrofolate reductase, TIGR00676: 5,10-methylenetetrahydrofolate reductase; High confidence in function and specificity; Belongs to the methylenetetrahydrofolate reductase family.
   
  
 0.742
dppC
Dipeptide transport system permease protein dppC; High confidence in function and specificity.
 
    0.739
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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