STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
llmg_0353Putative transcription regulator; Protein of unknown function DUF24; Conserved hypothetical protein. (115 aa)    
Predicted Functional Partners:
llmg_0354
Putative glyoxylase; Glyoxalase/extradiol ring-cleavage dioxygenase; Family membership.
       0.635
araJ
Putative arabinose efflux permease; Major facilitator superfamily; Family membership.
 
     0.624
napB
Transcriptional regulator, MarR family; High confidence in function and specificity.
   
  
 0.568
llmg_1868
HTH-type transcriptional regulator; Family membership.
   
  
 0.564
llmg_1804
Transcriptional regulator Rgg/GadR/MutR family; Family membership.
   
  
 0.561
rdrB
PF00455: Bacterial regulatory proteins, deoR family; Conserved hypothetical protein.
   
  
 0.560
llmg_1419
Putative transcriptional regulator.
     
 0.559
llmg_0161
Putative HTH-type transcriptional regulator; Homeodomain-like, Bacterial regulatory proteins, tetR family; Conserved hypothetical protein.
   
  
 0.556
llmg_1554
Transcriptional regulator, TetR family; Homeodomain-like; Family membership.
   
  
 0.556
llmg_1660
Transcriptional regulator, TetR family; Family membership.
   
  
 0.556
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.