STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
llmg_0485Putative membrane protein; PF06271.1: RDD family protein, contains AL9 export element; Family membership. (131 aa)    
Predicted Functional Partners:
llmg_0486
Putative membrane protein.
       0.800
llmg_0490
Sugar transport system permease protein; Specificity unclear.
     
 0.796
llmg_2515
Hypothetical protein predicted by Glimmer/Critica.
      
 0.689
llmg_1104
Drug-export protein; Family membership.
      
 0.650
llmg_0527
Conserved hypothetical protein.
      
 0.626
llmg_2023
UspA Universal stress protein family; High confidence in function and specificity.
     
 0.562
llmg_1210
Multidrug resistance protein; PF07690: Major facilitator superfamily, TIGR00711: drug resistance transporter, EmrB/QacA subfamily; Conserved hypothetical protein.
      
 0.556
llmg_2513
Putative transport protein; Region start changed from 2468930 to 2468918 (-12 bases).
      
 0.553
llmg_0487
Putative trehalose/maltose hydrolase; Glycoside transferase, six-hairpin, Glycosyl hydrolase family 65 central catalytic domain; Specificity unclear.
       0.548
llmg_0484
Transcriptional regulator, LacI family; Function unclear.
       0.533
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.