STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oppDOligopeptide transport ATP-binding protein oppD; High confidence in function and specificity; Belongs to the ABC transporter superfamily. (338 aa)    
Predicted Functional Partners:
oppB
Binding-protein-dependent transport systems inner membrane component; High confidence in function and specificity.
 
 0.999
oppC
Binding-protein-dependent transport systems inner membrane component; High confidence in function and specificity.
  
 0.999
dppC
Dipeptide transport system permease protein dppC; High confidence in function and specificity.
  
 0.996
oppC2
Binding-protein-dependent transport systems inner membrane component; High confidence in function and specificity.
  
 0.986
llmg_1458
Putative Di/Tri-peptide transport system permease protein; Specificity unclear.
  
 0.982
dppB
Pseudogene; Dipeptide-binding protein precursor., Contains stopcodon at position 706; High confidence in function and specificity.
 
 0.959
oppA
Oligopeptide-binding protein oppA precursor; Bacterial extracellular solute-binding protein, family 5; High confidence in function and specificity.
 
  
 0.956
oppF
Oligopeptide transport ATP-binding protein oppF; High confidence in function and specificity; Belongs to the ABC transporter superfamily.
 
  
0.947
ftsE
Cell division ATP-binding protein; Part of the ABC transporter FtsEX involved in cellular division.
 
     
0.900
oppB2
Binding-protein-dependent transport systems inner membrane component; High confidence in function and specificity.
 
 0.873
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.