Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
llmg_0719 | llmg_0720 | llmg_0719 | llmg_0720 | Putative ABC transporter substrate binding protein; Similar to peptide ABC-type transporters; Function unclear. | Conserved hypothetical protein; Putative transposase helper protein for IS981. | 0.651 |
llmg_0719 | tnp712-3 | llmg_0719 | llmg_0718 | Putative ABC transporter substrate binding protein; Similar to peptide ABC-type transporters; Function unclear. | Pseudogene; Transposase for insertion sequence element IS712C (fragment), Integrase, catalytic region; Specificity unclear. | 0.775 |
llmg_0719 | tnp981-6 | llmg_0719 | llmg_0721 | Putative ABC transporter substrate binding protein; Similar to peptide ABC-type transporters; Function unclear. | Transposase for insertion sequence element IS981G; Integrase, catalytic region; High confidence in function and specificity. | 0.634 |
llmg_0720 | llmg_0719 | llmg_0720 | llmg_0719 | Conserved hypothetical protein; Putative transposase helper protein for IS981. | Putative ABC transporter substrate binding protein; Similar to peptide ABC-type transporters; Function unclear. | 0.651 |
llmg_0720 | tnp712-3 | llmg_0720 | llmg_0718 | Conserved hypothetical protein; Putative transposase helper protein for IS981. | Pseudogene; Transposase for insertion sequence element IS712C (fragment), Integrase, catalytic region; Specificity unclear. | 0.651 |
llmg_0720 | tnp981-6 | llmg_0720 | llmg_0721 | Conserved hypothetical protein; Putative transposase helper protein for IS981. | Transposase for insertion sequence element IS981G; Integrase, catalytic region; High confidence in function and specificity. | 0.762 |
tnp712-3 | llmg_0719 | llmg_0718 | llmg_0719 | Pseudogene; Transposase for insertion sequence element IS712C (fragment), Integrase, catalytic region; Specificity unclear. | Putative ABC transporter substrate binding protein; Similar to peptide ABC-type transporters; Function unclear. | 0.775 |
tnp712-3 | llmg_0720 | llmg_0718 | llmg_0720 | Pseudogene; Transposase for insertion sequence element IS712C (fragment), Integrase, catalytic region; Specificity unclear. | Conserved hypothetical protein; Putative transposase helper protein for IS981. | 0.651 |
tnp712-3 | tnp981-6 | llmg_0718 | llmg_0721 | Pseudogene; Transposase for insertion sequence element IS712C (fragment), Integrase, catalytic region; Specificity unclear. | Transposase for insertion sequence element IS981G; Integrase, catalytic region; High confidence in function and specificity. | 0.634 |
tnp981-6 | llmg_0719 | llmg_0721 | llmg_0719 | Transposase for insertion sequence element IS981G; Integrase, catalytic region; High confidence in function and specificity. | Putative ABC transporter substrate binding protein; Similar to peptide ABC-type transporters; Function unclear. | 0.634 |
tnp981-6 | llmg_0720 | llmg_0721 | llmg_0720 | Transposase for insertion sequence element IS981G; Integrase, catalytic region; High confidence in function and specificity. | Conserved hypothetical protein; Putative transposase helper protein for IS981. | 0.762 |
tnp981-6 | tnp712-3 | llmg_0721 | llmg_0718 | Transposase for insertion sequence element IS981G; Integrase, catalytic region; High confidence in function and specificity. | Pseudogene; Transposase for insertion sequence element IS712C (fragment), Integrase, catalytic region; Specificity unclear. | 0.634 |