STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ps304CI; Repressor, IPR010982: Lambda repressor-like, DNA-binding, PF01381: Helix-turn-helix; High confidence in function and specificity. (165 aa)    
Predicted Functional Partners:
ps303
Hypothetical protein predicted by Glimmer/Critica; PF06114: Protein of unknown function DUF955.
  
  
 0.793
ps302
Hypothetical protein predicted by Glimmer/Critica.
       0.603
ps301
PF00589: Phage integrase family; High confidence in function and specificity; Belongs to the 'phage' integrase family.
 
    0.485
llmg_0008
Putative HTH-type transcriptional regulator; DNA binding Helix-turn-helix motif; Conserved hypothetical protein.
  
     0.401
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.