STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ps350Conserved hypothetical protein; Putative minor tail protein. (1566 aa)    
Predicted Functional Partners:
ps352
Conserved hypothetical protein.
 
     0.939
ps337
Hypothetical protein predicted by Glimmer/Critica; TIGR01641 : phage putative head morphogenesis protein, SPP1 gp7 family.
 
   
 0.806
ps334
TIGR01547: phage terminase, large subunit, PBSX family.
 
   
 0.787
ps335
PF05133: Phage portal protein, SPP1 Gp6-like, TIGR01538: phage portal protein, SPP1 family; Conserved hypothetical protein.
 
     0.785
ps351
Conserved hypothetical protein.
       0.781
ps349
Conserved hypothetical protein.
       0.702
ps348
Conserved hypothetical protein.
       0.540
ps308
Conserved hypothetical protein; Putative antirepressor.
  
     0.513
ps353
Conserved hypothetical protein.
       0.477
ps342
Major head protein.
 
     0.445
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.