STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ps352Conserved hypothetical protein. (845 aa)    
Predicted Functional Partners:
ps350
Conserved hypothetical protein; Putative minor tail protein.
 
     0.939
ps335
PF05133: Phage portal protein, SPP1 Gp6-like, TIGR01538: phage portal protein, SPP1 family; Conserved hypothetical protein.
 
  
 0.794
ps337
Hypothetical protein predicted by Glimmer/Critica; TIGR01641 : phage putative head morphogenesis protein, SPP1 gp7 family.
 
     0.785
ps351
Conserved hypothetical protein.
       0.779
ps334
TIGR01547: phage terminase, large subunit, PBSX family.
 
     0.713
ps349
Conserved hypothetical protein.
       0.646
llmg_2465
Conserved hypothetical protein; PF06458: MucBP domain.
 
     0.590
tnp905-3
Pseudogene; Transposase for insertion sequence element IS905D, contains a stop codon at position 606; High confidence in function and specificity.
  
     0.526
ps353
Conserved hypothetical protein.
  
    0.505
ps348
Conserved hypothetical protein.
       0.498
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.