STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uxuAD-mannonate hydrolase; Catalyzes the dehydration of D-mannonate; Belongs to the mannonate dehydratase family. (358 aa)    
Predicted Functional Partners:
uxuB
Fructuronate reductase; High confidence in function and specificity.
 
 0.998
uxaC
UxaC protein; High confidence in function and specificity.
 
  
 0.983
uxuT
Na-galactoside symporter; Major facilitator superfamily MFS_1; High confidence in function and specificity.
 
   
 0.936
kdgR
Bacterial regulatory proteins, gntR family; High confidence in function and specificity.
 
   
 0.930
kdgA
Pseudogene; 2-keto-3-deoxygluconate kinase; High confidence in function and specificity.
 
   
 0.873
rpiB
Ribose 5-phosphate isomerase B; High confidence in function and specificity.
   
 
  0.833
gntZ
GntZ protein; PF03446: NAD binding domain of 6-phosphogluconate dehydrogenase, TIGR00872: gnd_rel: 6-phosphogluconate dehydrogenase (decarboxylating); High confidence in function and specificity.
    
 0.813
gnd
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
     
  0.800
rpe2
Ribulose-phosphate 3-epimerase; High confidence in function and specificity.
     
  0.800
rpe
Ribulose-phosphate 3-epimerase; High confidence in function and specificity; Belongs to the ribulose-phosphate 3-epimerase family.
     
  0.800
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.