STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uxaCUxaC protein; High confidence in function and specificity. (472 aa)    
Predicted Functional Partners:
uxuB
Fructuronate reductase; High confidence in function and specificity.
 
 
 0.996
uxuA
D-mannonate hydrolase; Catalyzes the dehydration of D-mannonate; Belongs to the mannonate dehydratase family.
 
  
 0.983
uxuT
Na-galactoside symporter; Major facilitator superfamily MFS_1; High confidence in function and specificity.
 
   
 0.937
kdgR
Bacterial regulatory proteins, gntR family; High confidence in function and specificity.
 
   
 0.879
llmg_1320
Putative xylan beta-1,4-xylosidase; Pseudogene; Conserved hypothetical protein; Belongs to the glycosyl hydrolase 43 family.
    
 0.813
llmg_1608
Putative glycosyl hydrolases; Similar to xylosidases/arabinosidases; Function unclear; Belongs to the glycosyl hydrolase 43 family.
    
 0.813
kdgA
Pseudogene; 2-keto-3-deoxygluconate kinase; High confidence in function and specificity.
 
   
 0.811
llmg_0861
Conserved hypothetical protein; Galactose mutarotase-like; Function unclear.
       0.752
llmg_1162
Sialic acid-specific 9-O-acetylesterase; Pseudogene; Conserved hypothetical protein.
 
     0.451
aguA
AguA protein; PF07488: Glycosyl hydrolase family 67 middle domain, PF07477: Glycosyl hydrolase family 67 C-terminus; High confidence in function and specificity.
 
   
 0.426
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.