STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
llmg_0875Cation-transporting ATPase; MgtC/SapB family protein; Family membership. (223 aa)    
Predicted Functional Partners:
llmg_1666
Putative membrane protein.
  
  
 0.613
ctpE
Cation-transporting ATPase, E1-E2 family; ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase; High confidence in function and specificity.
  
 
 0.484
pacL
Cation-transporting ATPase, E1-E2 family; Specificity unclear.
  
 
 0.484
llmg_1086
Similar to cation (calcium) transporting ATPase; Specificity unclear.
  
 
 0.484
mgtA
Cation-transporting P-ATPase; PF00122: E1-E2 ATPase, PF00690: Cation transporter/ATPase, N-terminus; High confidence in function and specificity.
  
 
 0.484
llmg_1318
PF00122: E1-E2 ATPase, TIGR01647: plasma-membrane proton-efflux P-type ATPase; High confidence in function and specificity.
  
 
 0.484
llmg_2541
Cation transporting ATPase; Specificity unclear.
  
 
 0.484
ftsH
Putative cell division protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 
 0.462
atpB
ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.
    
 
 0.441
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.