STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
llmg_0924Pseudogene; Putative secreted protein, Contains a frameshift at position 1809; Conserved hypothetical protein. (353 aa)    
Predicted Functional Partners:
llmg_0921
Putative secreted protein.
 
    0.794
llmg_0920
Pseudogene; Putative secreted protein, Contains a stopcodon at position 411.
 
  
 0.788
llmg_0922
Putative secreted protein.
 
    0.787
llmg_1093
Putative secreted protein; Bacterial protein of unknown function DUF916; Conserved hypothetical protein.
  
     0.775
llmg_1079
Conserved hypothetical protein; Protein of unknown function DUF1093.
  
     0.566
acaP
Putative amino-acid permease; Involved in aspartate and glutamate uptake. Plays no significant role in the excretion of accumulated glutamate.
  
     0.496
llmg_1933
Conserved hypothetical protein.
  
     0.469
llmg_0925
Putative transcriptional regulator; Lambda repressor-like, DNA-binding; Family membership.
       0.465
fadD
Long-chain acyl-CoA synthetase; Acetyl-coenzyme A synthetase; High confidence in function and specificity.
  
     0.456
llmg_1676
ABC transporter permease protein; Protein of unknown function DUF214; Function unclear.
 
    0.437
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.