STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
llmg_0954Conserved hypothetical protein. (89 aa)    
Predicted Functional Partners:
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 3'-5' and 5'-3' exonuclease activity.
  
  
 0.705
trxH
Thioredoxin domain 2; Conserved hypothetical protein.
   
 0.651
llmg_1773
Conserved hypothetical protein; CsbD-like protein; Belongs to the UPF0337 (CsbD) family.
 
   
 0.608
llmg_0953
Putative membrane protein; Protein of unknown function DUF1113; Conserved hypothetical protein.
       0.592
nrdH
Glutaredoxin-like protein nrdH; Electron transport system for the ribonucleotide reductase system NrdEF.
  
 
 0.548
msrB
Peptide methionine sulfoxide reductase msrB 2, Mss4-like, SelR domain, TIGR00357: methionine-R-sulfoxide reductase; High confidence in function and specificity.
  
 
 0.540
llmg_0955
PF00107.12: Zinc-containing alcohol dehydrogenase superfamily; High confidence in function and specificity.
  
    0.521
llmg_2335
PF01569: PAP2 superfamily, putative membrane-associated phospholipid phosphatase; Conserved hypothetical protein.
 
     0.492
llmg_0137
Permeases of the major facilitator superfamily, von Willebrand factor, type A.
 
     0.485
gadR
Positive regulator GadR; Activates chloride dependent transcription of gadCB, TIGR01716: Transcriptional activator Rgg/GadR/MutR, C-terminal domain; High confidence in function and specificity.
  
     0.441
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.