STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
llmg_0996Pseudogene; Predicted MDR-type permease, Major facilitator superfamily, missing N-terminal end (frameshift); Conserved hypothetical protein. (208 aa)    
Predicted Functional Partners:
llmg_0998
TIGR01484: HAD-superfamily hydrolase, subfamily IIB; Family membership.
     
 0.651
llmg_0248
Transcriptional regulator, TetR family; Function unclear.
  
     0.580
llmg_0141
Putative Transcriptional regulator; Tetracyclin repressor-like, C-terminal; Conserved hypothetical protein.
  
     0.562
llmg_0995
Hydrolase, haloacid dehalogenase-like family protein; HAD-superfamily subfamily IA hydrolase; Family membership.
      
 0.558
ymbI-2
Conserved hypothetical protein; Putative transposase helper protein for IS981.
      
 0.551
llmg_1234
Conserved hypothetical protein; Putative transposase helper protein for IS981.
      
 0.551
llmg_1819
Conserved hypothetical protein; Putative patatin like protein.
  
     0.488
purD
Phosphoribosylamine--glycine ligase; High confidence in function and specificity; Belongs to the GARS family.
     
 0.430
llmg_0576
Pseudogene; Putative transport protein, Major facilitator superfamily, Contains a stopcodon at position 303; Conserved hypothetical protein.
  
     0.427
purE
Phosphoribosylaminoimidazole carboxylase catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).
     
 0.425
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.