STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
llmg_1112Conserved hypothetical protein; Protein of unknown function DUF1312. (135 aa)    
Predicted Functional Partners:
gerCA
Heptaprenyl diphosphate synthase component I; High confidence in function and specificity.
 
    0.975
ispB
Similar to heptaprenyl diphosphate synthase component II; High confidence in function and specificity; Belongs to the FPP/GGPP synthase family.
 
    0.893
gidB
Glucose-inhibited division protein; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
       0.779
noxB
NADH dehydrogenase; High confidence in function and specificity.
 
    0.755
apbE-2
Thiamine biosynthesis lipoprotein apbE precursor; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
 
     0.743
llmg_1583
Putative prenyltransferase; Specificity unclear.
 
     0.688
noxA
NADH dehydrogenase; High confidence in function and specificity.
 
    0.628
ubiA
Putative prenyltransferase, UbiA family; Probable 1,4-dihydroxy-2-naphthoate octaprenyltransferase; High confidence in function and specificity.
 
     0.589
apbE
Thiamine biosynthesis lipoprotein apbE precursor; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
 
     0.576
galU
UDP--glucose-1-phosphate uridylyltransferase; High confidence in function and specificity.
       0.574
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.