STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
llmg_1115XpaC-like protein; Similar to Bacillus subtilis xpaC gene, involved in cell morphology; Specificity unclear. (208 aa)    
Predicted Functional Partners:
telA1
Toxic anion resistance protein; High confidence in function and specificity; Belongs to the TelA family.
 
  
 0.987
llmg_1650
Putative secreted protein; Region start changed from 1627838 to 1627784 (-54 bases).
  
   
 0.974
llmg_2164
Hypothetical protein.
  
  
 0.923
dxsA
Pseudogene; 1-deoxyxylulose-5-phosphate synthase, Contains frameshift at position 413; High confidence in function and specificity; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.902
llmg_1644
Putative membrane protein.
  
   
 0.876
llmg_1353
ORF53; PF05816: Toxic anion resistance protein (TelA); Belongs to the TelA family.
 
  
 0.813
llrG
Response regulator; Conserved hypothetical protein.
      
 0.757
llmg_0169
Hypothetical protein predicted by Glimmer/Critica; Transmembrane protein.
      
 0.755
kinG
Histidine kinase; High confidence in function and specificity.
      
 0.755
llmg_0165
Conserved hypothetical protein; Predicted integral membrane protein.
      
 0.754
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.