STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nupBPurine/cytidine ABC transporter permease protein; High confidence in function and specificity; Belongs to the binding-protein-dependent transport system permease family. (364 aa)    
Predicted Functional Partners:
nupC
Purine/cytidine ABC transporter permease protein; High confidence in function and specificity; Belongs to the binding-protein-dependent transport system permease family.
 
0.999
nupA
Purine/cytidine ABC transporter ATP-binding protein; High confidence in function and specificity.
 
 0.999
bmpA
Basic membrane protein A.
 
 
 0.976
rbsD-2
Ribose ABC transporter permease protein RbsD; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
     0.628
deoB
Putative phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.
 
    0.598
llmg_1124
Conserved hypothetical protein; Similar to rRNA (guanine-N1-)-methyltransferase; Family membership.
  
    0.458
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.