STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yneHPotential redox protein; structural similarity to proteins involved in arsenate reduction in the oxydoreduction reaction, Arsenate reductase and related, PF03960: ArsC family; Conserved hypothetical protein. (123 aa)    
Predicted Functional Partners:
llmg_0165
Conserved hypothetical protein; Predicted integral membrane protein.
      
 0.872
comGC
Putative competence protein ComGC; Specificity unclear.
 
   
 0.764
llmg_0169
Hypothetical protein predicted by Glimmer/Critica; Transmembrane protein.
      
 0.753
llmg_1115
XpaC-like protein; Similar to Bacillus subtilis xpaC gene, involved in cell morphology; Specificity unclear.
      
 0.751
llmg_1650
Putative secreted protein; Region start changed from 1627838 to 1627784 (-54 bases).
      
 0.751
recU
Putative recombination protein U; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family.
  
     0.741
llmg_0907
Hypothetical protein; Predicted metal-binding, possibly nucleic acid-binding protein, Protein of unknown function DUF177; Conserved hypothetical protein; ORF2.
  
     0.739
llmg_0380
Conserved hypothetical protein; Contains CYTH domain., Similar to adenylate cyclases.
  
     0.735
ftsQ
Cell division protein ftsQ; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.
  
     0.678
rpmB
Ribosomal protein L28; Conserved hypothetical protein; Belongs to the bacterial ribosomal protein bL28 family.
  
    0.670
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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