STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
llmg_1186Conserved hypothetical protein; PF03672: Protein of unknown function UPF0154. (79 aa)    
Predicted Functional Partners:
yneH
Potential redox protein; structural similarity to proteins involved in arsenate reduction in the oxydoreduction reaction, Arsenate reductase and related, PF03960: ArsC family; Conserved hypothetical protein.
  
     0.653
llmg_1130
Conserved hypothetical protein; Arsenate reductase and related, Similar to regulatory protein spx; Belongs to the ArsC family.
  
     0.618
llmg_1703
Conserved hypothetical protein; Similar to regulatory protein spx; Family membership; Belongs to the ArsC family.
  
     0.609
recU
Putative recombination protein U; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family.
  
     0.604
llmg_0380
Conserved hypothetical protein; Contains CYTH domain., Similar to adenylate cyclases.
  
     0.586
rpmF
Ribosomal L32p protein; High confidence in function and specificity; Belongs to the bacterial ribosomal protein bL32 family.
  
    0.539
lysA
LysA protein; PF00278: Pyridoxal-dependent decarboxylase, C-terminal sheet domain, TIGR01048: diaminopimelate decarboxylase; High confidence in function and specificity.
       0.539
murI
MurI protein; Provides the (R)-glutamate required for cell wall biosynthesis.
       0.524
llmg_1188
Conserved hypothetical protein; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
       0.524
ftsQ
Cell division protein ftsQ; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.
  
     0.502
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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