STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
llmg_1241Conserved hypothetical protein; Pseudogene. (236 aa)    
Predicted Functional Partners:
bglP
Pseudogene; 3' end of bglR, Interrupted by insertion element; Conserved hypothetical protein.
  
 
 0.852
llmg_1426
Sucrose-specific PTS system IIBC component; High confidence in function and specificity.
  
 
 0.852
llmg_0454
PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component; High confidence in function and specificity.
  
 
 0.788
llmg_1240
Pseudogene; PF00356: Bacterial regulatory proteins, lacI family, Contains frameshift at position 525; Conserved hypothetical protein.
  
  
 0.742
llmg_1242
Conserved hypothetical protein; Pseudogene.
       0.682
llmg_1243
Conserved hypothetical protein; Putative endoglucanase, IPR008928: Glycoside transferase, six-hairpin; High confidence in function and specificity.
  
    0.609
llmg_1244
Conserved hypothetical protein; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
  
    0.608
llmg_1245
Conserved hypothetical protein; Putative hydrolase, haloacid dehalogenase-like family, TIGR00099: Cof-like hydrolase.
       0.508
llmg_0284
Conserved hypothetical protein; ATPase involved in DNA repair.
  
     0.490
fruA
Pseudogene; Transposase for insertion sequence IS1077F (fragment); High confidence in function and specificity.
  
  
 0.415
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.