STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
llmg_1260Conserved hypothetical protein; Pseudogene, putative general stress protein, PF03780: Protein of unknown function DUF322. (86 aa)    
Predicted Functional Partners:
llmg_1258
Conserved hypothetical protein; Putative membrane protein.
 
     0.932
llmg_1263
Conserved hypothetical protein; Pseudogene, putative general stress protein, PF03780: Protein of unknown function DUF322.
 
     0.815
llmg_2145
Hypothetical protein; --.
 
     0.783
llmg_1257
Conserved hypothetical protein; Putative membrane protein, PF04226: Transglycosylase-associated protein.
 
    0.764
llmg_1259
Hypothetical protein predicted by Glimmer/Critica; Putative membrane protein.
       0.719
llmg_0905
Conserved hypothetical protein.
  
     0.537
llmg_0524
Putative membrane protein.
  
     0.535
llmg_1773
Conserved hypothetical protein; CsbD-like protein; Belongs to the UPF0337 (CsbD) family.
 
   
 0.481
llmg_2146
Conserved hypothetical protein; -.
 
    0.424
llmg_0238
Conserved hypothetical protein; GCN5-related N-acetyltransferase; Family membership.
  
     0.415
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.