STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
llmg_1310Conserved hypothetical protein; TPR domain protein. (418 aa)    
Predicted Functional Partners:
llmg_1311
Conserved hypothetical protein; Putative membrane protein, PF01594: Domain of unknown function DUF20.
      0.845
pmpA
Foldase protein prsA precursor; Plays a major role in protein secretion by helping the post- translocational extracellular folding of several secreted proteins.
 
     0.794
llmg_2290
Conserved hypothetical protein; IPR000051: SAM (and some other nucleotide) binding motif.
  
     0.773
ecsB
PF05975: Bacterial ABC transporter protein EcsB; Family membership.
  
     0.766
llmg_0495
Uncharacterized protein conserved in bacteria.
  
     0.758
llmg_0513
Conserved hypothetical protein; Protein of unknown function DUF1273; Belongs to the UPF0398 family.
  
     0.757
ftsQ
Cell division protein ftsQ; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.
 
     0.750
ezrA
Septation ring formation regulator; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family.
  
     0.747
llmg_1751
Alkaline phosphatase superfamily protein.
  
     0.724
dnaB
Chromosome replication initiation / membrane attachment protein; High confidence in function and specificity.
  
     0.675
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.