STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
llmg_1379Predicted Zn peptidase. (394 aa)    
Predicted Functional Partners:
ltrC
LtrC protein.
     0.982
llmg_1381
Hypothetical protein; ORF27.
     
 0.897
llmg_1377
Hypothetical protein; ORF30.
     
 0.883
llmg_1378
Hypothetical protein; ORF29.
     
 0.861
llmg_1385
Hypothetical protein; ORF23.
     
 0.819
llmg_1364
Hypothetical protein; ORF43.
  
 
 0.767
llmg_1382
Hypothetical protein; ORF26.
     
 0.727
llmg_1384
Hypothetical protein; ORF24.
     
 0.720
llmg_1373
Hypothetical protein; ORF34; IPR008687: Bacterial mobilisation.
     
 0.711
traD
PF02534: TraG/TraD family; Conserved hypothetical protein.
 
     0.699
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.