STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
llmg_1391Conserved hypothetical protein; Region start changed from 1367033 to 1366889 (-144 bases). (748 aa)    
Predicted Functional Partners:
llmg_1392
Conserved hypothetical protein; ORF16.
     
 0.984
llmg_1390
Conserved hypothetical protein; ORF18.
 
   
 0.983
llmg_1393
Conserved hypothetical protein; ORF15.
 
   
 0.978
llmg_1385
Hypothetical protein; ORF23.
     
 0.960
traD
PF02534: TraG/TraD family; Conserved hypothetical protein.
 
  
 0.952
llmg_1387
Hypothetical protein; ORF21; Specificity unclear.
     
 0.933
llmg_1382
Hypothetical protein; ORF26.
     
 0.923
llmg_1384
Hypothetical protein; ORF24.
     
 0.906
llmg_1397
Hypothetical protein; ORF12.
     
 0.879
ltrC
LtrC protein.
 
     0.832
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.