STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
llmg_1392Conserved hypothetical protein; ORF16. (117 aa)    
Predicted Functional Partners:
llmg_1393
Conserved hypothetical protein; ORF15.
     
 0.986
llmg_1391
Conserved hypothetical protein; Region start changed from 1367033 to 1366889 (-144 bases).
     
 0.984
llmg_1390
Conserved hypothetical protein; ORF18.
     
 0.980
llmg_1396
Hypothetical protein; ORF13.
     
 0.940
ps347
Major tail protein.
      
 0.903
llmg_1348
Hypothetical protein; ORF58.
      
 0.902
llmg_1381
Hypothetical protein; ORF27.
     
 0.879
llmg_1389
Hypothetical protein; ORF19.
     
 0.878
llmg_1387
Hypothetical protein; ORF21; Specificity unclear.
     
 0.870
llmg_1388
Conserved hypothetical protein; ORF20; putative membrane protein.
     
 0.870
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.