STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
llmg_1458Putative Di/Tri-peptide transport system permease protein; Specificity unclear. (339 aa)    
Predicted Functional Partners:
llmg_1459
Putative Di/Tri-peptide transport system permease protein; Specificity unclear.
 
 0.998
llmg_1457
oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein; Specificity unclear; Belongs to the ABC transporter superfamily.
  
 0.996
llmg_1460
Putative Di/Tri-peptide transport ATP-binding protein; Specificity unclear; Belongs to the ABC transporter superfamily.
  
 0.996
oppD
Oligopeptide transport ATP-binding protein oppD; High confidence in function and specificity; Belongs to the ABC transporter superfamily.
  
 0.982
dppD
Dipeptide transport ATP-binding protein dppD; High confidence in function and specificity; Belongs to the ABC transporter superfamily.
  
 0.981
dppF
Dipeptide transport ATP-binding protein dppF; High confidence in function and specificity; Belongs to the ABC transporter superfamily.
  
 0.980
oppF
Oligopeptide transport ATP-binding protein oppF; High confidence in function and specificity; Belongs to the ABC transporter superfamily.
  
 0.969
llmg_1461
Putative Di/Tri-peptide binding protein precursor; Specificity unclear.
 
 
 0.938
dppB
Pseudogene; Dipeptide-binding protein precursor., Contains stopcodon at position 706; High confidence in function and specificity.
  
 0.902
metN
Amino acid ABC transporter ATP binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
    0.868
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.