STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
llmg_1521Glycosyl transferase; Family membership. (318 aa)    
Predicted Functional Partners:
llmg_1522
Putative membrane protein.
 
  
 0.837
kinE
Sensor kinase protein; High confidence in function and specificity.
   
 
 0.505
llrE
Two-component system regulator llrE; Response regulator receiver domain; High confidence in function and specificity.
       0.497
llmg_1523
Conserved hypothetical protein; Similar to acid phosphatase/vanadium-dependent haloperoxidases.
       0.483
llmg_1517
Lipid phosphate phosphatase 1 (EC 3.1.3.-) (AtLPP1) (Phosphatidic acid phosphatase 1) (AtPAP1) (Prenyl diphosphate phosphatase)., Acid phosphatase/vanadium-dependent haloperoxidase, PAP2 superfamily; Function unclear.
     
 0.482
llmg_1519
Putative membrane protein.
       0.465
llmg_1727
ABC transporter permease protein.
  
  
 0.403
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.