STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tagGTeichoic acid ABC transporter permease protein; High confidence in function and specificity. (268 aa)    
Predicted Functional Partners:
tagH
Teichoic acid export ATP-binding protein tagH; Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system.
 
  
 0.996
tagF
Teichoic acid biosynthesis protein F; Putative CDP-glycerol:glycerophosphate glycerophosphotransferase; High confidence in function and specificity.
 
  
 0.919
tagL
Exopolysaccharide biosynthesis protein; High confidence in function and specificity.
     
 0.838
rgpD
Polysaccharide ABC transporter ATP-binding protein RgpD; High confidence in function and specificity.
 
   
 0.809
tagB
Teichoic acid biosynthesis protein B; Putative ribitolphosphotransferase (EC 2.7.8.-); Specificity unclear.
 
  
 0.805
llmg_1620
Conserved hypothetical protein; Glycosyl transferase, group 2 family protein, Glycosyltransferases involved in cell wall biogenesis; Family membership.
  
  
 0.770
llmg_1621
Conserved hypothetical protein; Glycosyl transferase, group 2 family protein, Glycosyltransferases involved in cell wall biogenesi; Family membership.
  
  
 0.769
rgpC
Capsule polysaccharide export inner-membrane protein RgpC; ABC-2 type transporter; Conserved hypothetical protein.
  
     0.741
llmg_1618
Conserved hypothetical protein.
       0.737
llmg_1619
Hypothetical protein predicted by Glimmer/Critica.
       0.737
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.