STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
llmg_1628Putative secreted protein. (213 aa)    
Predicted Functional Partners:
llmg_2422
Hypothetical protein predicted by Glimmer/Critica.
  
     0.562
rfbX
Putative O-antigen transporter; Polysaccharide biosynthesis protein; Family membership.
  
     0.501
rmaH
Pseudogene; Putative multidrug resistance protein, Major facilitator superfamily, contains stopcodon at position 231; Function unclear.
       0.472
llmg_0223
Putative galactofuranose transferase.
  
     0.465
llmg_1629
Methyltransferase, UbiE/COQ5 family; Family membership.
       0.461
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.